Jean-Martial Mari

CV professionnel de Jean-Martial Mari

Fonctions universitaires

  • Maître de Conférences en Informatique, HDR

  • Responsable pédagogique L3 Informatique


Parcours académique

  • 2012: Habilitation à Diriger des Recherches soutenue le 28 Novembre 2012 devant l'Université Claude Bernard Lyon 1. Titre : Le traitement signal ultrasonore et la mesure de la perfusion sanguine dans l'aide au diagnostic et au traitement.

  • 2004: Thèse de Doctorat en Acoustique de l'Université Claude Bernard Lyon I (école doctorale MEGA), au laboratoire CREATIS sous la supervision du Prof. C. Cachard, en collaboration avec l'Institut des Sciences Cognitives (Lyon Bron) et le Biomedical Imaging Group de l'EPFL. Soutenue en décembre 2004. Titre : Localisation d'inclusions fortement échogènes en tissus mous, Application à la détection d'électrode.

  • 2000 : DEA Images & Systèmes au CREATIS. Major (1/18)

  • 2000 :    Ingénieur Génie Electrique de l'INSA de Lyon, spécialité Traitement du Signal et de l'Image

  • 1997 :    Label Euphoria, premier diplôme Européen créé pour le cycle EURINSA, composé de deux tiers d'étudiants européens (1994-1997)

  • 1994 :    Baccalauréat séries C, Lycée Ambroise Vollard, Ile de La Réunion

Cursus professionnel

  • Sept.2014 : Maitre de Conférences à l'Université de la Polynésie française, Département STS, Laboratoire GePaSud
  • 2013-2014 : Associé de Recherche au Collège Universitaire de Londres, au Département de Physique Médicale et de Bio-ingénierie
  • 2011-2012 : Chercheur contractuel à l'unité INSERM 1032 "Applications Thérapeutiques des Ultrasons” (LabTAU)
  • 2010-2011 : Ingénieur de Recherche contractuel à l'INSERM U1032
  • 2007-2010 : Associé de Recherche au Collège Imperial de Londres, Département de Bio-ingénierie
  • 2005-2007 : Assistant de Recherche à l'Université d'Oxford, au Wolfson Medical Vision Science laboratory
  • 2003-2005 : ATER en informatique à l'Université Claude Bernard Lyon I, France
  • 2000-2003 : Moniteur en Informatique à l'INSA de Lyon, France.
  • 2000-2003 : Allocataire de Recharche MNERT, Université Claude Bernard Lyon I

Domaines de recherche

  • Traitement du signal et de l'image,
  • acoustique médicale,
  • imagerie ultrasonore,
  • contrôle non destructif,
  • imagerie médicale,
  • photo-acoustique,
  • acoustique thérapeutique,
  • instrumentation, experimentation.


1.  Xia, Mari, West, Ourselin, Desjardins. In-plane ultrasonic needle tracking using a fiber-optic hydrophone. Medical physics, In-press.

2.  Xia, Nikitichev, Mari, West, Pratt, David, Ourselin, Beard, Desjardins. Performance characteristics of an interventional multispectral photoacoustic imaging system for guiding minimally invasive procedures. J. Biomed. Opt. 08/2015; 20(8):86005.

3.  Thakku, Tham, Baskaran, Mari, Strouthidis, Aung, Cheng, Girard. A Global Shape Index to Characterize Anterior Lamina Cribrosa Morphology and its Determinants in Healthy Indian Eyes. IOVS. 2015 Jun 1;56(6):3604-14.

4.  Grasland-Mongrain, Destrempes, Mari, Souchon, Catheline, Chapelon, Lafon, Cloutier. Acousto-electrical speckle pattern in Lorentz force electrical impedance tomography. Physics in Medicine and Biology. 60 3747.

5.  Girard, Ang, Chung, Strouthidis, Mehta, Mari. Enhancement of Corneal Visibility in Optical Coherence Tomography Images using Corneal Adaptive Compensation. TSVT May 2015, Vol.4, 3.

6.  Rhodes, Huisingh, Johnstone, Fazio, Smith, Clark, Downs, Owsley, Girard, Mari, Girkin. Peripapillary Choroidal Thickness Variation with Age and Race in Normal Eyes. Invest Ophthalmol Vis Sci. 2015 Feb 24.

7.  Gupta, Saw, Cheung, Girard, Mari, Bhargava, Tan, Tan, Yang, Tey, Nah, Zhao, Wong, Cheng. Choroidal Thickness and High Myopia: A Case-control Study of Young Chinese Men in Singapore. Acta Ophth. 2014 Dec 21.

8.  Lee, Kim, Weinreb, Lee, Girard, Mari. Anterior Lamina Cribrosa Insertion in Primary Open-Angle Glaucoma Patients and Healthy Subjects. PLoS One. 2014 Dec 22;9(12):e114935. 

9.  Girard, Tun, Husain, Acharyya, Haaland, Xin, Mari, Perera, Baskaran, Aung, Strouthidis. Lamina Cribrosa Visibility using Optical Coherence Tomography: Comparison of Devices and Effects of Image Enhancement Techniques. Invest Ophthalmol Vis Sci. 2015 Jan 15;56(2):865-74.

10. Rhodes, Huisingh, Johnstone, Fazio, Smith, Clark, Downs, Owsley, Girard, Mari, Girkin. Variation of Laminar Depth in Normal Eyes with Age and Race. Invest Ophthalmol Vis Sci. November 20, 2014 IOVS-14-15251.

11. Hong, Yang,Wei, Deng, Kong, Chen, Girard, Mari, Xu, Sun. Schlemm's Canal Expands After Trabeculectomy in Patients With Primary Angle–Closure Glaucoma. Invest Ophthalmol Vis Sci. 2014, 55 (9), 5637-5642.

12. West, Mari, Khan, Wan, Zhu, Koutsakos, Rowe, Kamming, Desjardins. Development of an Ultrasound Phantom for Spinal Injections With 3-Dimensional Printing. Regional anesthesia and pain medicine 2014, 39 (5), 429-433

13. Gupta, Sidhartha, Girard, Mari, Wong, Cheng. A Simplified Method to Measure Choroidal Thickness Using Adaptive Compensation in Enhanced Depth Imaging Optical Coherence Tomography. PLoSOne 2014 5;9(5):e96661. Epub 2014 May 5. 

14. Kim, Lee, Kim, Girard, Mari, Weinreb. Recent Structural Alteration of the Peripheral Lamina Cribrosa Near the Location of Disc Hemorrhage in Glaucoma. Invest Ophthalmol Vis Sci. 2014 Apr 28;55(4):2805-15.

15. Johnstone, Fazio, Rojananuangnit, Smith, Clark, Downs, Owsley, Girard, Mari, Girkin. Variation of the Axial Location of Bruch's Membrane Opening with Age, Choroidal Thickness and Race. Invest Ophthalmol Vis Sci. 2014 Mar 28;55(3):2004-9.

16. Mari. Study of Fourier-based velocimetry. Open Journal of Acoustics, 2013, 3, 21-32.

17. Girard, Strouthidis, Desjardins, Mari, Ethier. In vivo optic nerve head biomechanics: performance testing of a three-dimensional tracking algorithm. Journal of The Royal Society Interface, 10 (87), 20130459.

18. Grasland-Mongrain, Catheline, Mari, Souchon, Zorgani, Petit, Cartellier, Lafon, Chapelon. Thermal lesion imaging using Lorentz force: Proofs of concept. J Acoust Soc Am. 2013 Nov;134(5):4182.

19. Grasland-Mongrain, Mari, Glles, Poizat, Chapelon, Lafon. Lorentz Force Hydrophone Characterisation. IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control, 02/2014; 61(2):353-63.

20. Grasland-Mongrain, Mari, Chapelon, Lafon. Lorentz Force Electrical Impedance Tomography. IRBM, Volume 34, Issues 4–5, November 2013, Pages 357–360.

21. Foin, Mari, Nijjer, Sen, Petraco, Ghione, Di Mario, Davies, Girard. Intracoronary imaging using attenuation-compensated optical coherence tomography allows better visualisation of coronary artery diseases. Cardiovasc Revasc Med. 2013 May-Jun;14(3):139-43.

22. Grasland-Mongrain, Mari, Gilles, Chapelon, Lafon. Electromagnetic hydrophone for high-intensity focused ultrasound measurement. The Journal of the Acoustical Society of America, 05/2013; 133(5):3230.

23. Mari, Strouthidis, Park, Girard. Enhancement of Lamina Cribrosa Visibility in Optical Coherence Tomography Images using Adaptive Compensation. Invest Ophthalmol Vis Sci 54(3):2238-2247 2013.

24. Mari, Bouchoux, Dillenseger, Gimonet, Birer, Garnier, Brasset, Ke, Guey, Fleury, Chapelon, Blanc. Study of a dual-mode array integrated in a multi-element transducer for imaging and therapy of prostate cancer. IRBM Volume 34, Issue 2, April 2013, Pages 147–158. 

25. Mari, Lafon, Chapelon. Detection of Deeply-Implanted Impedance-Switching Devices Using Ultrasound Doppler. IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control 60(6):1074-1083 2013.

26. Lafon, Somaglino, Bouchoux, Mari, Chesnais, Ngo, Mestas, Fossheim, Nilssen, Chapelon. Feasibility study of cavitation induced liposomal doxorubicin release in an AT2 Dunning rat tumor model. Journal of Drug Targeting. 2012 Sep;20(8):691-702. 

27. Lafon, Mestas, Ngo, Somaglino, Mari, Chesnais, Nilssen, Chapelon. Stable inertial cavitation with a confocal ultrasonic device for drug release from nongaseous sonosensitive liposomes. J Acoust Soc Am. 2012 Apr;131(4):3248.

28. Foin, Mari, Davies, Di Mario, Girard. Imaging of Coronary artery plaques content using contrast enhanced optical coherence tomography. Eur Heart J Cardiovasc Imaging 14(1):85 Jan 2013.

29. Grasland-Mongrain, Mari, Gilles, Chapelon, Lafon. Electromagnetic Hydrophone with Tomographic System for Absolute Velocity Field Mapping. Applied Physics Letters. J Acoust Soc Am. 2012 Apr;131(4):3526.

30. Poelma, van der Mijle, Mari, Tang, Weinberg, Westerweel. Ultrasound imaging velocimetry: toward reliable wall shear stress measurements. European Journal of Mechanics - B/Fluids, (September 2012), pp. 70-75.

31. Mari, Khoo, Riga, Coppola, Bicknell, Caro. Index proposal and basic estimator study for quantification of oscillation of the secondary flow pattern in tortuous vessels. Ultrasonics, 2012. doi:10.1016/j.ultras.2011.08.015.

32. Kam, Mari, Wigmore. Adjacent central venous catheters can result in immediate aspiration of infused drugs during renal replacement therapy. Anaesthesia. 2012 Feb;67(2):115-21.

33. Girard, Strouthidis, Ethier, Mari. Shadow Removal and Contrast Enhancement in Optical Coherence Tomography Images of the Human Optic Nerve Head. 2011. Invest Ophthalmol and Vis Sci. May 6, 2011.

34. Mari, Cachard. Ultrasonic scanning of straight micro tools in soft biological tissues: methodology and implementation. Ultrasonics Vol.51, Issue 5, pp. 632-63, July 2011.

35. Mahue, Mari, Eckersley, Tang. Comparison of pulse subtraction Doppler and pulse inversion Doppler. IEEE Trans. UFFC, Vol 58 Issue 1, January 2011.

36. Mari, Hibbs, Stride, Eckersley, Tang. An approximate nonlinear model for Time Gain Compensation of Amplitude Modulated images of ultrasound contrast agent perfusion. IEEE Trans. UFFC, DOI 10.1109/TUFFC.2010.1487.

37. Poelma, Mari, Foin, Tang, Krams, Caro, Weinberg, Westerweel. 3D flow reconstruction using ultrasound PIV. Experiments in Fluids, 2009, DOI 10.1007/s00348-009-0781-8.

38. Mari, BouMatar, Blu, Cachard, Unser. A bulk modulus dependent linear model for acoustical imaging. J. Acoust. Soc. Am. 125, 2413 (2009); DOI:10.1121/1.3087427.

39. Tang, Mari, Eckersley, Wells. Attenuation correction in ultrasound contrast imaging: elementary theory and preliminary experimental evaluation. Ultr. in Med. Biol. Volume 34, Issue 12, pp 1998, 2008.

40. Uhercik, Barva, Kybic, Mari, Duhamel, Cachard, Hlaváć. Parallel integral projection transform for electrode localization in 3D ultrasound images. IEEE Trans. UFFC, 2008.

41. Mari, Cachard. Acquire real time RF digital ultrasound data from a commercial scanner. Technical Acoustics, 2007.

42. Said, Basset, Mari, Cachard, Brusseau, Vray. Experimental three dimensional strain estimation from ultrasonic sectorial data, Ultrasonics, 44:189-193, May 2006.

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